Pseudoknoten Rolf Backofen. Yovisto Academic Video Search. Teil 3/3 wmx whx Matrix EIS max Extended substitute Rekursion graphical Scheme Recursion recurrence Multiloop i..j Complexity Albert Ludwigs University of Freiburg substitut matrix whx instead required see figur below furth oth matric which allow explicitly demanding binding insid rang considered whereas impossibl pseudoknot can created different typ rang considered whereas impossibl pseudoknot can created different typ substitut matrix whx instead required see figur below furth oth matric which allow explicitly demanding binding insid wm-rekursion graphical illustration recurrenc structur using diagram corresponding min paired single-stranded left right with bifurcation wm-rekursion graphical illustration recurrenc structur using diagram corresponding min paired single-stranded left right with bifurcation pseudoknot max nested multiloop non-nested with extended v-matrix matrix eis recurrenc structur recursion schem max remaining equation extend unbound new finally wm-matrix multiloop cas energy best structur sequenc rang which part corresponding diagram dashed lin nothing known about binding betwe wm-rekursion graphical illustration recurrenc structur using diagram corresponding min paired single-stranded left right with bifurcation eis representation recurrenc following principl backus-naur form diagram probl get exponential becaus consideration possibl cas multiloops thus aborted ord great than achieved insertion bifurcation certain sit interval arising from this min multiloop with wm-matrix multiloop cas energy best structur sequenc rang which part corresponding diagram dashed lin nothing known about binding betwe with eis representation recurrenc following principl backus-naur form diagram probl get exponential becaus consideration possibl cas multiloops thus aborted ord great than achieved insertion bifurcation certain sit interval arising from this min multiloop recursion schem max remaining equation extend unbound new finally extended v-matrix matrix eis recurrenc structur pseudoknot max nested multiloop non-nested with complexity spac tim probl structur difficult characteriz condon classifying pseudoknoted high due matric with four possibl yes akutsu extended v-matrix matrix eis recurrenc structur pseudoknot max nested multiloop non-nested with akutsu simpl pseudoknoted structur recursiv pseudoknot combination two stem loops properti exist with are hairpin complexity spac tim probl structur difficult characteriz condon classifying pseudoknoted high due matric with four possibl yes akutsu whx recurrenc equation matrix optimal paired single-stranded nested bifurcation non-nested zhx matrix recurrenc structur vhx matrix eis recurrenc structur with optimal extended v-matrix matrix eis recurrenc structur pseudoknot max nested multiloop non-nested with prediction h-typ pseudo knot typ common version eddy rivas extension zuk algorithm this matric therefor graphical illustration w-matrix top-level-recurrenc recurrenc energy best structur sequenc rang illustration using diagram substitut matrix whx instead required see figur below furth oth matric which allow explicitly demanding binding insid rang considered whereas impossibl pseudoknot can created different typ